Humboldt-Universität zu Berlin - Mathematisch-Naturwissenschaftliche Fakultät - Wissensmanagement in der Bioinformatik

Seminar Advanced Data Warehousing - Literatur

Agarwal, S., Agrawal, R., Deshpande, P., Gupta, A., Naughton, J. F., Ramakrishnan, R. and Sarawagi, S. (1996). "On the Computation of Multidimensional Aggregates". 22nd Conference on Very Large Data Bases, Bombay, India.

Agrawal, R., Imielinski, T. and Swami, A. (1993). "Mining Association Rules between Sets of Items in Large Databases". ACM SIGMOD Int. Conference on Management of Data 1993, Washington DC, USA.

Agrawal, R. and Srikant, R. (1994). "Fast Algorithms for Mining Association Rules". 20th Conference on Very Large Database Systems, Santiago de Chile, Chili.

Blaschke, Valencia (2001). "Can Bibliographic Pointers for Known Biological Data be Found Automatically? Protein Interactions as a Case Study." Comp. Funct. Genom. 2001; 2:196-206.

Chaudhuri, S. and Shim, K. (1995). "An Overview of Cost-Basd Optimization of Queries with Aggregates." Data Engineering Bulletin 18(3):2-9.

Chaudhuri, S. and Narasayya, V. (1997). "An Efficient, Cost-driven Index Selection Tool for Microsoft SQL server". 23rd Conference on Very Large Database Systems, Athens, Greece.

Craven, M. and Kumlien, J. (1999). "Constructing Biological Knowledge Bases by Extracting Information from Text Sources." Proc Int Conf Intell Syst Mol Biol. 1999, pp.77-86.
[ PMID: 10786289]

Deshpande, P., Ramasamy, K., Shukla, A. and Naughton, J. F. (1998). "Caching Multidimensional Queries Using Chunks". SIGMOD Conference, Seattle, Washington.

Fukuda K., Tamura A., Tsunoda T., Takagi T.J. (1998). "Toward information extraction: identifying protein names from biological papers" Pac Symp Biocomput. 1998;:707-18.
[ PMID: 9697224]

Golfarelli, M., Rizzi, S. and Saltarelli, E. (2002). "Index selection for data warehousing". 4th International Workshop on Design and Management of Data Warehouses.

Harinarayan, V., Rajaraman, A. and Ullman, J. D. (1996). "Implementing Data Cubes Efficiently". SIGMOD, Montreal, Canada.

Iliopoulos. I., Enright, A.J. and Ouzounis, C.A. (2001). "TextQuest: Document Clustering of MEDLINE Abstracts for Concept Discovery in Molecular Biology." Pac Symp Biocomput. 2001, pp.384-395.
[ PMID: 11262957]

Korn, F., Sidiropoulos, N., Faloutsos, C., Siegel, E. and Protopapas, Z. (1996). "Fast Nearest Neighbor Search in Medical Image Databases". 22nd Conference on Very Large Data Bases, Bombay, India.

Kretschmann, E., Fleichermann, W. and Apweiler, R. (2001). "Automatic Rule Generation for Protein Annotation with the C4.5 Data Mining Algorithm Applied on SWISS-PROT." Bioinformatics 17(10): 920-926.
[ PMID: 11673236]

Lehner, W. (2003). "Datenbanktechnologie für Data-Warehouse-Systeme", dpunkt.verlag. (Kap. 8.3)

Marcotte, E.M., Xenarios, I. and Eisenberg, D. (2003). "Mining Literature for Protein-Protein Interactions". Bioinformatics, 17(4):359-363. [ PMID: 11301305]

Nenadic, G., Spasic, I. and Ananiadou, S. (2003). "Terminology-driven Mining of Biomedical Literature". Bioinformatics, 19(8):938-943. [ PMID: 12761055]

Proux D., Rechenmann F., Julliard L., Pillet V.V., Jacq B. (1998). "Detecting Gene Symbols and Names in Biological Texts: A First Step toward Pertinent Information Extraction". Genome Inform Ser Workshop Genome Inform. 1998;9:72-80. [ PMID: 11072323]

Scheuermann, P., Shim, J. and Vingralek, R. (1996). "WATCHMAN : A Data Warehouse Intelligent Cache Manager". 22nd Conference on Very Large Data Bases.

Seidl, T. and Kriegel, H.-P. (1998). "Optimal Multi-Step k-Nearest Neighbor Search". SIGMOD, Seattle, Washington.

Shukla, A., Deshpande, P. and Naughton, J. F. (1998). "Materialized View Selection for Multidimensional Datasets." 24th Conference on Very Large Database Systems, New York.

Tanabe, L. and Wilbur, W.J. (2002). "Tagging Gene and Protein Names in Biomedical Text." Bioinformatics, 18(8):1124-1132.
[ PMID: 12176836]

Zhang, C., Naughton, J., DeWitt, D., Luo, Q and Lohman, G. (2001). "On Supporting Containment Queres in Relational Database Management Systems." SIGMOD Conference, pp.