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Humboldt-Universität zu Berlin - Mathematisch-Naturwissenschaftliche Fakultät - Wissensmanagement in der Bioinformatik

Wissensmanagement in der Bioinformatik

Prof. Dr. Ulf Leser


News

  • 10.07.2019: Mündliche Prüfungen in der vorlesungsfreien Zeit (jeweils für alle Module):
    • 02.08.2019
    • 23.09.2019
  • 26.05.2019: WBI team wins 2019 CLEF international eHealth challenge on mapping ICD-10 codes to non-technical texts.
  • 08.05.2019: Leon Weber receives award for one of the best student thesis in 2018 at the Institut for Computer Science, for his master thesis on " NLProlog - Logisches Schlussfolgern durch schwache Verifikation für NLP"
  • 03.05.2019: The German Research council has approved funding for our new research unit (Forschergruppe) "Beyond the exome: Finding, analyzing, and predicting the disease potential of non-coding DNA variants" (speaker: Markus Schueltke-Gerstenfeld, Charite Berlin). Recruitment will start soon.
  • 2.10.2018: Interview mit Prof. Leser (auf Deutsch) zur Frage KI in der Krebstherapie.
  • 03.05.2018: An was wir forschen: Suchmaschinen für die personalisierte Onkologie

Für Studenten

 

Research

  • Running projects
  • Finished projects
  • Software and downloads
  • Finished dissertations in the group
  • All publications; latest:
    • Kulbe et al.: Discovery and validation of novel biomarkers for detection of epithelial ovarian cancer, Cells
    • Saenger et al.: Classifying German Animal Experiment Summaries with Multi-lingual BERT at CLEF eHealth 2019 Task 1, CLEF Working Notes.
    • Weber et al.: HUNER: Improving Biomedical NER with Pretraining, Bioinformatics.
    • Trescher and Leser: Estimation of Transcription Factor Activity in Knockdown Studies, Nature Scientific Reports.
    • Seva et al.: VIST – A Variant-Information Search Tool for Precision Oncology, BMC Bioinformatics.
    • Pallarz et al.: Comparative Analysis of Public Knowledge Bases for Precision Oncology, JCO - Precision Oncology.
    • Witt et al.: Learning Low-Wastage Memory Allocations for Scientific Workflows at IceCube, HPCS.