Humboldt-Universität zu Berlin - Mathematisch-Naturwissenschaftliche Fakultät - Wissensmanagement in der Bioinformatik

Wissensmanagement in der Bioinformatik

Prof. Dr. Ulf Leser




  • 12.1.2023: The Elephant in the Data Center: Ulf Leser and Lauritz Thamsen blog on energy consumption of workflow executions at the Workflow Community Initiative.
  • 24.11.2022: The chair has an open research position (PhD or PostDoc, three years) in the field of information extraction / decision support for precision oncology.
  • 18.10.2022: Im SFB FONDA ist eine Studentische Hilfskraftstelle zum nächstmöglichen Zeitpunkt zu besetzen. Wir forschen an verteilten Systemen für die Analyse von Satellitenbildern.
  • 17.10.2022: Two prestigious awards for former member of WBI
    • Dr. Zehlike is awarded the price for "best dissertation at Humboldt-Universität zu Berlin in 2021/2022" for her thesis on Fairness in Rankings
    • Mr. Clauß is awarded the price for "best Master thesis at Humboldt-Universität zu Berlin in 2021/2022" for his thesis on "Variable Length Motif Discovery in Time Series"
    Congratulations to both winners!
  • 12.06.2022: What we research: Calculating the "fingerprints" of molecules with artificial intelligence.
  • 29.05.2020: The German Research Council has approved funding of the Collaborative Research Center (CRC) 1404 "FONDA - Foundations of Workflows for Large-Scale Scientific Data Analysis" (see press release).


Für Studierende

  • Alle Lehrveranstaltungen des Lehrstuhls
  • Offene, laufende und abgeschlossene (2022, 2021, 2020, 2019, 2018, früher) Studien- und Diplomarbeiten
    • Best thesis award Humboldt-Universität 2022, L. Clauß
    • Best dissertation award Humboldt-Universität 2022, Dr. M. Zehlike
    • Best thesis award Computer Science 2022, L. Clauß
    • Best thesis award Computer Science 2018, L. Weber
    • Best thesis award Computer Science 2016, M. Sänger
    • Best thesis award Computer Science 2013, T. Rocktäschel
  • Lehrbuch Informationsintegration (inklusive Folien und Errate).
  • Auswertung der Studentenbefragung vom Dezember 2004


Science Communications


  • Running projects
  • Finished projects
  • Software and downloads
  • Finished dissertations in the group
  • All publications; latest:
    • Lehmann et al.: How Workflow Engines should talk to Resource Managers: A Proposal for a Common Workflow Scheduling Interface, CCGrid
    • Otto et al.: Transcriptomic deconvolution of neuroendocrine neoplasms predicts clinically relevant characteristics, Cancers
    • Ermshaus et al.: ClaSP - Parameter-free Time Series Segmentation, DAMI
    • Schäfer et al.: Motiflets - Simple and Accurate Detection of Motifs in Time Series, PVLDB