Humboldt-Universität zu Berlin - Mathematisch-Naturwissenschaftliche Fakultät - Willkommen bei SOAMED

Dr. med. Dipl.-Inf.

Johannes Starlinger

Adresse:

Institut für Informatik
Humboldt Universität zu Berlin
Rudower Chaussee 25

12489 Berlin

Raum: 4.404

+49-30-2093-3909

E-Mail:

starlinger(at)soamed.de

Informatikstudium an der Humboldt Universität zu Berlin

Thema der Diplomarbeit:

"Integration of clinical record data with special consideration of diagnosis classification"

Thema der Studienarbeit:

"Integration and visualization of heterogeneous annotation results of the BioCreAtIvE Meta-Server"

Medizinstudium an der Medizinischen Universität Wien 

Matura am Bundesgymnasium Tanzenberg, Maria Saal, Österreich

Johannes Starlinger, Bryan Brancotte, Sarah Cohen-Boulakia and Ulf Leser:

"Similarity Search for Scientific Workflows"

PVLDB, accept.

Wandelt, S.; Starlinger, J.; Bux, M. and Leser, U.:

"RCSI: Scalable similarity search in thousend(s) of genomes."

PVLDB (accepted) 2013.

Thomas, P.; Starlinger, J. and Leser, U.:

"Experiences from Developing the Domain-Specific Entity Search Engine GeneView"

BTW, Magdeburg, Germany, 2013.

Starlinger, J., Cohen-Boulakia, S. and Leser, U.:

"(Re)Use in Public Scientific Workflow Repositories"

Proceedings of the 24 ^th International Conference on Scientific and Statistical Database Management (SSDBM'12)

Chania, Grete, Greece, 2012, pp. 361-378.

Thomas, P., Starlinger, J., Vowinkel, A., Arzt, S. and Leser, U.:

"GeneView: A comprehensive semantic search engine for PubMed."

Nucleic Acids Res. , 2012 Jul; 40(Web Server issue): W585-W591.

Sebastian Arzt, Johannes Starlinger, Oliver Arnold, Stefan Kröger, Samira Jaeger, Ulf Leser:

"PiPa: Costum Integration of Protein Interactions and Pathway"

GI-Jahrestagung 2011, Workshop: "Daten in den Lebenswissenschaften".

Johannes Starlinger, Bernd Schmeck, Ulf Leser:

"Challenges in Automatic Diagnosis Extraction from Medical Examination Summaries"

CIKM 2011, Workshop on Web Science and Information Exchange on the Medical Web

Thomas, P., Starlinger, J., Jacob, C., Solt, I., Hakenberg, J. and Leser, U.:

"GeneView Gene-Centric Ranking of Biomedical Text"

Proceedings of BioCreative III, Bethesda, USA, 2010. pp 137-142

Johannes Starlinger, Florian Leitner, Alfonso Valencia, and Ulf Leser:

"SOA-based Integration of Text Mining Services"

Proceedings of the 2009 Congress on Services, pp.99-106.