Humboldt-Universität zu Berlin - Faculty of Mathematics and Natural Sciences - Welcome to SOAMED

Dipl.-Inf.

Marc Bux

Address:

Institut für Informatik
Humboldt Universität zu Berlin
Rudower Chaussee 25

12489 Berlin

Raum: 4.404

Phone:

+49-30-2093-3909

Fax:

+49-30-2093-5484

Homepage

marc_bux

E-Mail:

bux(at)soamed.de

2005 - 2011

Computer Science minor subject Psychology at Humboldt-Universität zu Berlin,

Title of Diploma Thesis:

"Comparing literature-enriched experimental gene co-expression networks in colorectal cancer"

Student of Resarch Thesis:

"Chemical Structure Search for Text Corpora"

2004

University-Entrance Diploma at Alexander-von-Humboldt-Gymnasium in Greifswald

Carl Witt, Marc Bux, Wladislaw Gusew, Ulf Leser: Predictive Performance Modeling in Distributed Computing using Black-Box Monitoring and Machine Learning, submitted to Future Generation Computing Systems.

M. Bux, J. Brandt, C. Witt, J. Dowling, U. Leser: Hi-WAY: Execution of Scientific Workflows on Hadoop YARN, 20^th International Conference on Extending Database Technology (EDBT), Venice, Italy.

J. Brandt, M. Bux, and U. Leser:

"Cuneiform - A Functional Language for Large Scale Scientific Workflow Execution Engine"

In Proceedings of the Workshops of the EDBT/ICDT, volume 1330, pages 17-26, Brussels, Belgium (2015).

Marc Bux, Jörgen Brandt, Carsten Lipka, Kamal Hakimzadeh, Jim Dowling, Ulf Leser:

SAASFEE: Scalable Scientific Workflow Execution Engine.

PVLDB 8(12): 1892-1903 (2015).

Alysson Bessani, Jörgen Brandt, Marc Bux, Vinicius Cogo, Lora Dimitrova, Jim Dowling, Ali Gholami, Kamal Hakimzadeh, Michael Hummel, Mahmoud Ismail, Erwin Laure, Ulf Leser, Jan-Eric Litton, Roxanna Martinez, Salman Niazi, Jane Reichel, and Karin Zimmermann.

"Biobankcloud: a plattform for the secure storage, sharing, and proceesing of large biomedical data sets"

In the First International Workshop on Data Management and Analytics for Medicine and Healthcare (DMAH 2015), September 2015

M. Bux, U. Leser (2014):

"DynamicCloudSim: Simulating Heterogeneity in Computational Clouds"

In: Future Generation Computer Systems.

Wandelt. S.; Starlinger, J.; Bux, M. and Leser; U. (2013) RCSI:

"Scalable similarity search in thousend(s) of genomes PVLDB" (accepted)

M. Bux, U. Leser (2013),

"DynamicCloudSim: Simulating Heterogeneity in Computational Clouds"

Int. Workshop on Scalable Workflow Enactment Engines and Technologies (SWEET'13)"

in conjunction with ACM SIGMOD Conference, New York, USA.

S. Wandelt, M. Bux and U. Leser (2013):

"Trends in Genome Compression"

Current, Bioinformatics

M. Bux, U. Leser (2013):

"Parallelization in Scientific Workflow Management Systems"

Technical Report CoRR/arXiv:1303.7195.

S. Wandelt, A. Rheinländer, M. Bux, L. Thalheim, B. Haldemann, U. Leser (2012):

"Data Management Challenges in Next Generation Sequencing"

Datenbank-Spektrum 12(3):161-171.