Humboldt-Universität zu Berlin - Mathematisch-Naturwissenschaftliche Fakultät - Wissensmanagement in der Bioinformatik

Finished Dissertations

Leon Weber-Genzel: Text Mining for Pathway Curation(HU eDoc)
Defense: 07. September 2023
Reviewers: Ulf Leser, Alan Akbik, Sophie Ananiadou
Jannes Münchmeyer: Machine Learning for fast and accurate assessment of earthquake source parameters (HU eDoc)
Defense: 16. August 2022
Reviewers: Ulf Leser, Frederick Tillmann, Greg Beroza
Meike Zehlike: Fairness in Ranking (HU eDoc)
Defense: 22. February 2022
Reviewers: Ulf Leser, Carlos Castillo, Krishna Gummadi
Raik Otto: Distance-Based Methods for the Analysis of Next-Generation Sequencing Data (HU eDoc)
Defense: 25. August 2021
Reviewers: Ulf Leser, Christine Sers, Andreas Keller
Jörgen Brandt: Cuneiform – A Functional Language for Large-Scale Data Analysis (HU eDoc)
Defense: 04. December 2020
Reviewers: Ulf Leser, Adelinde Uhrmacher, Wolfgang Reisig
Carl Witt: Predictive Resource Management for Scientific Workflows (HU eDoc)
Defense: 05. June 2020
Reviewers: Ulf Leser, Ewa Deelmann, Odej Kao
Saskia Trescher: Estimating Gene Regulatory Activity using Mathematical Optimization (HU eDoc)
Defense: 30. April 2020
Reviewers: Ulf Leser, Katja Nowick, Heike Siebert
Stefan Sprenger: Efficient Processing of Range Queries in Main Memory (HU eDoc)
Defense: 15. February 2019
Reviewers: Ulf Leser, Odej Kao, Kai-Uwe Sattler
Robert Franke: Novel Methods and Fast Algorithms for the Analysis of Complex Networks (HU eDoc)
Defense: 8. January 2019
Reviewers: Galina Ivanova (supervisor), Ulf Leser, Simone Kühn
Thomas Krause: ANNIS: A Graph-Based Query System for Deeply Annotated Text Corpora (HU eDoc)
Defense: 21. September 2018
Reviewers: Ulf Leser, Anke Lüdeling, Stefan Evert
Marc Bux: Scientific Workflows for Hadoop (HU eDoc)
Defense: 18. July 2018
Reviewers: Ulf Leser, Björn Scheuermann, Bernhard Mitschang
Karin Zimmermann: Differential Splicing in Lymphoma (HU eDoc)
Defense: 18. December 2017
Reviewers: Ulf Leser, Michael Hummel, Kay Nieselt
Tobias Rawald: Scalable and Efficient Analysis of Large High-Dimensional Data Sets in the Context of Recurrence Analysis (HU eDoc)
Defense: 1. December 2017
Reviewers: Ulf Leser, Jens Teubner, Doris Dransch
Alina Munteanu: Computational models to investigate binding mechanisms of regulatory proteins (HU eDoc)
Defense: 11. October 2017
Reviewers: Uwe Ohler (supervisor), Ulf Leser, Gordan Raluca
Lars Döhling: Extracting and Aggregating Temporal Events from Text (HU eDoc)
Defense: 22. September 2017
Reviewers: Ulf Leser, Niels Pinkwart, Michael Gertz
Stefan Kröger: Bioinformatics Analysis for T Helper Cell Subtypes Discrimination and Gene Regulatory Network Reconstruction (HU eDoc)
Defense: 7. July 2017
Reviewers: Ulf Leser, Joachim Selbig, Nils Blüthgen
Astrid Rheinländer: Scalable and Declarative Information Extraction in a Parallel Data Analytics System (HU eDoc)
Defense: 23. June 2017
Reviewers: Ulf Leser, Felix Naumann, Norbert Ritter
Philippe Thomas: Robust Relationship Extraction in the Biomedical Domain (HU eDoc)
Defense: 13. July 2015
Reviewers: Ulf Leser, Pierre Zweigenbaum, Kevin B. Cohen
Johannes Starlinger: Similarity Measures for Scientific Workflows (HU eDoc)
Defense: 26. May 2015
Reviewers: Ulf Leser, Mathias Weske, Carol Goble
Roger Castillo: Indexing RDF Data using Materialized SPARQL Queries (HU eDoc)
Defense: 4. May 2012
Reviewers: Ulf Leser, Johann-Christoph Freytag, Adrian Paschke
Silke Trißl: Cost-based Optimization of Graph Queries in Relational Database Management Systems (HU edoc)
Defense: 16. February 2012
Reviewers: Ulf Leser, Johann-Christoph Freytag, Torsten Grust
Samira Jaeger: Network-based inference of protein function and disease gene associations (HU edoc)
Defense: 16. December 2011
Reviewers: Ulf Leser, Oliver Kohlbacher, Miguel Andrade-Navarro
Long Nguyen: Text Mining for the Reconstruction of Protein-Protein Interaction Networks
Defense: 14. Oktober 2011
Reviewers: Ulf Leser, Hans-Dieter Burkhard, Domonkos Tikk
Thomas Kabisch: Extraction and Integration of Web Query Interfaces (HU eDoc)
Defense: 13. Juli 2011
Reviewers: Ulf Leser, Felix Naumann, Erhard Rahm
Armin Roth: Efficient query answering in peer data management systems (HU edoc)
Defense: 1. April 2011
Reviewers: Felix Naumann (supervisor), Ulf Leser, Kai-Uwe Sattler
Philip Groth: Knowledge management and discovery for genotype/phenotype data (HU edoc)
Defense: 26. November 2009
Reviewers: Ulf Leser, Hanspeter Herzel, Bertram Weiss
Jörg Hakenberg: Mining relations from the biomedical literature (HU edoc)
Defense: 11. September 2009
Reviews: Ulf Leser, Hans-Dieter Burkhard, Udo Hahn
Melanie Weiss: Duplicate Detection in XML Data (PDF)
Defense: 14. November 2007
Reviews: Felix Naumann (supervisor), Ulf Leser, Ioana Manolescu