+1 #(S1 (S (S (NP (JJ _PROT2_) (NN transcription)) (ADVP (RB also)) (VP (VBZ requires) (NP (DT the) (NN DNA) (NN binding) (NN protein) (NN _PROT1_)))) (. .)))
+1 #(S1 (S (S (PP (IN In) (NP (NN contrast))) (, ,) (NP (NN _PROT2_)) (VP (VP (VBZ is) (VP (VBN transcribed) (PP (IN in) (NP (DT the) (NN forespore) (NN compartment))) (PP (IN by) (NP (NP (NN RNA) (NN polymerase)) (PP (IN with) (NP (DT the) (JJ forespore-specific) (NN _PROT1_))))))) (CC and) (VP (VBZ appears) (S (VP (TO to) (VP (VB give) (NP (DT a) (JJ monocistronic) (NN transcript)))))))) (. .)))
+1 #(S1 (S (S (NP (JJ Transcriptional) (NNS studies)) (VP (VBD showed) (SBAR (IN that) (S (NP (NN _PROT2_)) (VP (VBZ is) (ADVP (RB strongly)) (VP (VBN induced) (PP (PP (IN in) (NP (NP (NN response)) (PP (TO to) (NP (NP (NN heat)) (, ,) (NP (NN ethanol)) (CC and) (NP (NN salt) (NN stress)))))) (CC or) (PP (IN after) (NP (NP (NN starvation)) (PP (IN for) (NP (NN glucose)))))) (PP (IN in) (NP (DT a) (ADJP (NN _PROT1_) (JJ _PROT1_)) (NN manner))))))))) (. .)))
+1 #(S1 (S (S (NP (DT The) (NNS results)) (VP (VBP indicate) (SBAR (IN that) (S (NP (NN _PROT1_)) (VP (VBZ is) (ADJP (JJ sufficient) (S (VP (VP (TO to) (VP (VB repress) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NP (NP (NN _PROT2_)) (CC and) (NP (NN _PROT_))) (NNS promoters)))))) (CC and) (VP (ADVP (RB also)) (TO to) (VP (VB activate) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NN _PROT_) (NN promoter)))))))))))))) (. .)))
+1 #(S1 (S (S (NP (DT The) (NNS results)) (VP (VBP indicate) (SBAR (IN that) (S (NP (NN _PROT1_)) (VP (VBZ is) (ADJP (JJ sufficient) (S (VP (VP (TO to) (VP (VB repress) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NP (NP (NN _PROT_)) (CC and) (NP (NN _PROT2_))) (NNS promoters)))))) (CC and) (VP (ADVP (RB also)) (TO to) (VP (VB activate) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NN _PROT_) (NN promoter)))))))))))))) (. .)))
+1 #(S1 (S (S (NP (DT The) (NNS results)) (VP (VBP indicate) (SBAR (IN that) (S (NP (NN _PROT1_)) (VP (VBZ is) (ADJP (JJ sufficient) (S (VP (VP (TO to) (VP (VB repress) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NP (NP (NN _PROT_)) (CC and) (NP (NN _PROT_))) (NNS promoters)))))) (CC and) (VP (ADVP (RB also)) (TO to) (VP (VB activate) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NN _PROT2_) (NN promoter)))))))))))))) (. .)))
-1 #(S1 (S (S (NP (DT The) (NNS results)) (VP (VBP indicate) (SBAR (IN that) (S (NP (NN _PROT_)) (VP (VBZ is) (ADJP (JJ sufficient) (S (VP (VP (TO to) (VP (VB repress) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NP (NP (NN _PROT1_)) (CC and) (NP (NN _PROT2_))) (NNS promoters)))))) (CC and) (VP (ADVP (RB also)) (TO to) (VP (VB activate) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NN _PROT_) (NN promoter)))))))))))))) (. .)))
-1 #(S1 (S (S (NP (DT The) (NNS results)) (VP (VBP indicate) (SBAR (IN that) (S (NP (NN _PROT_)) (VP (VBZ is) (ADJP (JJ sufficient) (S (VP (VP (TO to) (VP (VB repress) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NP (NP (NN _PROT1_)) (CC and) (NP (NN _PROT_))) (NNS promoters)))))) (CC and) (VP (ADVP (RB also)) (TO to) (VP (VB activate) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NN _PROT2_) (NN promoter)))))))))))))) (. .)))
-1 #(S1 (S (S (NP (DT The) (NNS results)) (VP (VBP indicate) (SBAR (IN that) (S (NP (NN _PROT_)) (VP (VBZ is) (ADJP (JJ sufficient) (S (VP (VP (TO to) (VP (VB repress) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NP (NP (NN _PROT_)) (CC and) (NP (NN _PROT1_))) (NNS promoters)))))) (CC and) (VP (ADVP (RB also)) (TO to) (VP (VB activate) (NP (NP (DT the) (NN transcription)) (PP (IN of) (NP (DT the) (NN _PROT2_) (NN promoter)))))))))))))) (. .)))
+1 #(S1 (S (PP (IN During) (NP (NP (NN endospore) (NN formation)) (PP (IN in) (NP (FW Bacillus) (FW subtilis))))) (, ,) (NP (DT the) (NN DNA) (NN binding) (NN protein) (NN _PROT1_)) (VP (VBZ stimulates) (NP (NP (NN transcription)) (PP (IN from) (NP (NP (JJ several) (NNS promoters)) (SBAR (WHNP (WDT that)) (S (VP (VBP are) (VP (VBN used) (PP (IN by) (NP (NP (NN RNA) (NN polymerase)) (VP (VBG containing) (NP (NN _PROT2_)))))))))))))))
+1 #(S1 (S (S (NP (NN _PROT1_)) (VP (VBZ binds) (PP (TO to) (NP (NP (DT a) (NN site)) (PP (IN on) (NP (NP (NP (CD one)) (PP (IN of) (NP (DT these) (NNS promoters)))) (, ,) (NP (NN _PROT2_)))) (, ,) (SBAR (WHNP (WDT that)) (S (VP (VBZ overlaps) (NP (PRP$ its) (CD -35) (NN region))))))))) (. .)))
+1 #(S1 (S (ADVP (RB Finally)) (, ,) (NP (PRP we)) (VP (VBP show) (SBAR (IN that) (S (NP (NP (JJ proper) (NN localization)) (PP (IN of) (NP (NN SpoIVA)))) (VP (VBD required) (NP (NP (DT the) (NN expression)) (PP (IN of) (NP (NP (QP (CD one) (CC or) (JJR more)) (NNS genes)) (SBAR (WHNP (WDT which)) (S (, ,) (PP (IN like) (NP (NN _PROT2_))) (, ,) (VP (VBP are) (PP (IN under) (NP (NP (DT the) (NN control)) (PP (IN of) (NP (DT the) (NN mother) (NN cell) (NN transcription) (NN factor) (NN _PROT1_))))))))))))))) (. .)))
